MICAS: Microsatellite Analysis Server 3.0

All Repeats of Mycobacterium avium subsp. paratuberculosis K-10

Total Repeats: 137095

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
137001	NC_002944	G	6	6	4825881	4825886	0 %	0 %	100 %	0 %	41410443
137002	NC_002944	CAC	2	6	4825911	4825916	33.33 %	0 %	0 %	66.67 %	41410443
137003	NC_002944	GCG	2	6	4825927	4825932	0 %	0 %	66.67 %	33.33 %	41410443
137004	NC_002944	TCA	2	6	4825943	4825948	33.33 %	33.33 %	0 %	33.33 %	41410443
137005	NC_002944	TCC	2	6	4825969	4825974	0 %	33.33 %	0 %	66.67 %	41410443
137006	NC_002944	GCC	2	6	4825975	4825980	0 %	0 %	33.33 %	66.67 %	41410443
137007	NC_002944	CGT	2	6	4826009	4826014	0 %	33.33 %	33.33 %	33.33 %	41410443
137008	NC_002944	CCG	2	6	4826075	4826080	0 %	0 %	33.33 %	66.67 %	41410443
137009	NC_002944	CG	3	6	4826121	4826126	0 %	0 %	50 %	50 %	41410443
137010	NC_002944	ACC	2	6	4826134	4826139	33.33 %	0 %	0 %	66.67 %	41410443
137011	NC_002944	CCA	2	6	4826162	4826167	33.33 %	0 %	0 %	66.67 %	41410443
137012	NC_002944	ACC	2	6	4826212	4826217	33.33 %	0 %	0 %	66.67 %	41410443
137013	NC_002944	CG	3	6	4826230	4826235	0 %	0 %	50 %	50 %	41410443
137014	NC_002944	GCCCC	2	10	4826258	4826267	0 %	0 %	20 %	80 %	41410443
137015	NC_002944	GAT	2	6	4826280	4826285	33.33 %	33.33 %	33.33 %	0 %	41410443
137016	NC_002944	CCG	2	6	4826315	4826320	0 %	0 %	33.33 %	66.67 %	41410443
137017	NC_002944	CGG	2	6	4826453	4826458	0 %	0 %	66.67 %	33.33 %	41410443
137018	NC_002944	GACCG	2	10	4826520	4826529	20 %	0 %	40 %	40 %	41410443
137019	NC_002944	GCC	2	6	4826586	4826591	0 %	0 %	33.33 %	66.67 %	Non-Coding
137020	NC_002944	GAC	2	6	4826641	4826646	33.33 %	0 %	33.33 %	33.33 %	41410444
137021	NC_002944	CCG	2	6	4826697	4826702	0 %	0 %	33.33 %	66.67 %	41410444
137022	NC_002944	CGT	2	6	4826709	4826714	0 %	33.33 %	33.33 %	33.33 %	41410444
137023	NC_002944	CGC	2	6	4826780	4826785	0 %	0 %	33.33 %	66.67 %	41410444
137024	NC_002944	TCC	2	6	4826813	4826818	0 %	33.33 %	0 %	66.67 %	41410444
137025	NC_002944	GCC	2	6	4826823	4826828	0 %	0 %	33.33 %	66.67 %	41410444
137026	NC_002944	TCT	2	6	4826874	4826879	0 %	66.67 %	0 %	33.33 %	41410444
137027	NC_002944	CGC	3	9	4826925	4826933	0 %	0 %	33.33 %	66.67 %	41410444
137028	NC_002944	CCA	2	6	4826937	4826942	33.33 %	0 %	0 %	66.67 %	41410444
137029	NC_002944	GTC	2	6	4826953	4826958	0 %	33.33 %	33.33 %	33.33 %	41410444
137030	NC_002944	CAC	2	6	4826974	4826979	33.33 %	0 %	0 %	66.67 %	41410444
137031	NC_002944	CAG	2	6	4827034	4827039	33.33 %	0 %	33.33 %	33.33 %	41410444
137032	NC_002944	CTC	2	6	4827040	4827045	0 %	33.33 %	0 %	66.67 %	41410444
137033	NC_002944	CTC	2	6	4827086	4827091	0 %	33.33 %	0 %	66.67 %	41410444
137034	NC_002944	GTC	2	6	4827095	4827100	0 %	33.33 %	33.33 %	33.33 %	41410444
137035	NC_002944	TCG	2	6	4827105	4827110	0 %	33.33 %	33.33 %	33.33 %	41410444
137036	NC_002944	CGG	2	6	4827130	4827135	0 %	0 %	66.67 %	33.33 %	41410444
137037	NC_002944	GGT	2	6	4827161	4827166	0 %	33.33 %	66.67 %	0 %	41410444
137038	NC_002944	CGG	2	6	4827234	4827239	0 %	0 %	66.67 %	33.33 %	Non-Coding
137039	NC_002944	CTT	2	6	4827275	4827280	0 %	66.67 %	0 %	33.33 %	41410445
137040	NC_002944	CCG	2	6	4827327	4827332	0 %	0 %	33.33 %	66.67 %	41410445
137041	NC_002944	GCCCGC	2	12	4827389	4827400	0 %	0 %	33.33 %	66.67 %	41410445
137042	NC_002944	CG	3	6	4827446	4827451	0 %	0 %	50 %	50 %	41410445
137043	NC_002944	CTT	2	6	4827470	4827475	0 %	66.67 %	0 %	33.33 %	41410445
137044	NC_002944	TGC	2	6	4827513	4827518	0 %	33.33 %	33.33 %	33.33 %	41410445
137045	NC_002944	TGT	2	6	4827535	4827540	0 %	66.67 %	33.33 %	0 %	41410445
137046	NC_002944	GAT	2	6	4827557	4827562	33.33 %	33.33 %	33.33 %	0 %	41410445
137047	NC_002944	ACC	2	6	4827588	4827593	33.33 %	0 %	0 %	66.67 %	41410445
137048	NC_002944	TCA	2	6	4827628	4827633	33.33 %	33.33 %	0 %	33.33 %	41410445
137049	NC_002944	GGC	2	6	4827650	4827655	0 %	0 %	66.67 %	33.33 %	41410445
137050	NC_002944	ATC	2	6	4827720	4827725	33.33 %	33.33 %	0 %	33.33 %	41410445
137051	NC_002944	CCG	2	6	4827748	4827753	0 %	0 %	33.33 %	66.67 %	41410445
137052	NC_002944	GGC	2	6	4827754	4827759	0 %	0 %	66.67 %	33.33 %	41410445
137053	NC_002944	TCGG	2	8	4827852	4827859	0 %	25 %	50 %	25 %	41410445
137054	NC_002944	CAC	2	6	4827893	4827898	33.33 %	0 %	0 %	66.67 %	41410445
137055	NC_002944	GGT	2	6	4827926	4827931	0 %	33.33 %	66.67 %	0 %	41410445
137056	NC_002944	GCA	2	6	4827946	4827951	33.33 %	0 %	33.33 %	33.33 %	41410445
137057	NC_002944	GGCA	2	8	4827993	4828000	25 %	0 %	50 %	25 %	41410445
137058	NC_002944	CTT	2	6	4828079	4828084	0 %	66.67 %	0 %	33.33 %	41410445
137059	NC_002944	GTG	2	6	4828128	4828133	0 %	33.33 %	66.67 %	0 %	41410445
137060	NC_002944	CAG	2	6	4828160	4828165	33.33 %	0 %	33.33 %	33.33 %	41410445
137061	NC_002944	GAA	2	6	4828211	4828216	66.67 %	0 %	33.33 %	0 %	41410445
137062	NC_002944	GGC	2	6	4828235	4828240	0 %	0 %	66.67 %	33.33 %	41410445
137063	NC_002944	AAC	2	6	4828242	4828247	66.67 %	0 %	0 %	33.33 %	41410445
137064	NC_002944	GTA	2	6	4828280	4828285	33.33 %	33.33 %	33.33 %	0 %	41410445
137065	NC_002944	GAA	2	6	4828301	4828306	66.67 %	0 %	33.33 %	0 %	41410445
137066	NC_002944	GCC	2	6	4828413	4828418	0 %	0 %	33.33 %	66.67 %	41410446
137067	NC_002944	GCCA	2	8	4828456	4828463	25 %	0 %	25 %	50 %	41410446
137068	NC_002944	GCG	2	6	4828550	4828555	0 %	0 %	66.67 %	33.33 %	41410446
137069	NC_002944	CGGC	2	8	4828609	4828616	0 %	0 %	50 %	50 %	41410446
137070	NC_002944	CCGGT	2	10	4828643	4828652	0 %	20 %	40 %	40 %	41410446
137071	NC_002944	CCG	2	6	4828666	4828671	0 %	0 %	33.33 %	66.67 %	41410447
137072	NC_002944	GC	3	6	4828709	4828714	0 %	0 %	50 %	50 %	41410447
137073	NC_002944	CGA	2	6	4828715	4828720	33.33 %	0 %	33.33 %	33.33 %	41410447
137074	NC_002944	GC	3	6	4828741	4828746	0 %	0 %	50 %	50 %	41410447
137075	NC_002944	GGGCC	2	10	4828787	4828796	0 %	0 %	60 %	40 %	41410447
137076	NC_002944	CGG	2	6	4828809	4828814	0 %	0 %	66.67 %	33.33 %	41410447
137077	NC_002944	CCG	2	6	4828834	4828839	0 %	0 %	33.33 %	66.67 %	41410447
137078	NC_002944	CGA	2	6	4828855	4828860	33.33 %	0 %	33.33 %	33.33 %	41410447
137079	NC_002944	TCG	3	9	4828887	4828895	0 %	33.33 %	33.33 %	33.33 %	41410447
137080	NC_002944	TGCG	2	8	4828996	4829003	0 %	25 %	50 %	25 %	41410447
137081	NC_002944	AG	3	6	4829039	4829044	50 %	0 %	50 %	0 %	41410448
137082	NC_002944	CG	3	6	4829045	4829050	0 %	0 %	50 %	50 %	41410448
137083	NC_002944	GCG	2	6	4829060	4829065	0 %	0 %	66.67 %	33.33 %	41410448
137084	NC_002944	CG	3	6	4829081	4829086	0 %	0 %	50 %	50 %	41410448
137085	NC_002944	GC	3	6	4829091	4829096	0 %	0 %	50 %	50 %	41410448
137086	NC_002944	ACG	2	6	4829175	4829180	33.33 %	0 %	33.33 %	33.33 %	41410448
137087	NC_002944	GTT	2	6	4829189	4829194	0 %	66.67 %	33.33 %	0 %	Non-Coding
137088	NC_002944	TGC	2	6	4829258	4829263	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
137089	NC_002944	GTG	2	6	4829286	4829291	0 %	33.33 %	66.67 %	0 %	Non-Coding
137090	NC_002944	CCGG	2	8	4829389	4829396	0 %	0 %	50 %	50 %	Non-Coding
137091	NC_002944	GCCA	2	8	4829422	4829429	25 %	0 %	25 %	50 %	Non-Coding
137092	NC_002944	AAGC	2	8	4829456	4829463	50 %	0 %	25 %	25 %	Non-Coding
137093	NC_002944	TTC	2	6	4829624	4829629	0 %	66.67 %	0 %	33.33 %	Non-Coding
137094	NC_002944	ATC	2	6	4829678	4829683	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
137095	NC_002944	GTT	2	6	4829715	4829720	0 %	66.67 %	33.33 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.